Quick answer
You can usually include an ATO payment plan in a business debt consolidation, and often it's worth it: general interest charge keeps compounding daily on plan debts and, for charges incurred from 1 July 2025, it's no longer tax deductible. Leave it out only if the plan is short, nearly finished, or including it would stretch the new loan beyond what the business can comfortably repay.
Key points
- Debts on an ATO payment plan keep accruing general interest charge, which compounds daily.
- General interest charge incurred on or after 1 July 2025 can't be claimed as a tax deduction.
- A plan can default if new lodgements or payments slip, making the whole balance due at once.
- The ATO lets you pay a plan off early at any time, so there's no exit fee to weigh.
- Keep paying the plan instalments right up until the new loan settles.
If you’re on an ATO payment plan and also juggling other business debts, the plan can usually go into the consolidation. Whether it should comes down to three things: how much interest is still building on it, how long it has left to run, and whether adding it keeps the new repayment comfortable. For most stretched businesses, paying the ATO out is worth a serious look.
Plenty of owners treat the payment plan as “sorted” because the ATO has agreed to it. The pressure goes quiet, the instalments go out, and attention shifts to the louder creditors. But a payment plan is still debt, and it carries its own costs and its own trapdoor. This guide looks at it the way a lender would when you’re putting a business debt refinance together.
Why does an ATO payment plan still cost you money?
A payment plan stops collection action while you keep up the instalments. It doesn’t stop the interest. The ATO’s own payment plans page is blunt about it: tax debts on a plan “continue to accrue GIC, which compounds daily”. The longer the plan, the more general interest charge you pay overall.
The second change is about tax. In its small business newsroom, the ATO confirms that general interest charge incurred on or after 1 July 2025 can no longer be claimed as a deduction. The same article notes that a registered tax professional may recommend a business loan, and that some interest on loans connected with running a business may be deductible. Ask your accountant how that applies to you, but the direction is clear: ATO interest has quietly become a more expensive way to carry debt than it used to be.
What happens if the plan defaults while you’re refinancing?
This is the trap. The ATO expects you to lodge and pay new obligations on time while a plan is running. If you don’t, the plan may default and the full overdue balance becomes payable immediately.
Refinancing takes some weeks of attention, and it’s easy for a BAS lodgement or a new quarter’s GST to slip while you’re gathering bank statements and payout letters. If that happens, the debt you thought was parked on a tidy instalment schedule can suddenly be due in one hit, and your consolidation goes from planned to urgent.
Three rules keep you safe:
- Keep paying every instalment until the new loan has settled and the ATO has actually received the money.
- Lodge everything on time during the application, even if you can’t pay the new amount yet.
- Tell the lender about any lodgement that’s due before settlement so it can be built into the timing.
When should the ATO plan go into the consolidation?
Here’s a simple way to sort it.
| Situation | Usually include it? | Why |
|---|---|---|
| Large plan with a year or more to run | Yes | Daily compounding interest on a big balance adds up, and it’s no longer deductible from July 2025 |
| Plan has defaulted or is close to it | Yes, as a priority | A defaulted plan makes the whole balance due and invites firmer collection action |
| Small plan with only a few instalments left | Often no | Borrowing costs may outweigh the saving; let it run out |
| Separate income tax and activity statement plans | Case by case | You can include one and leave the other |
| Including it would push the new loan beyond what trading can carry | No, or restructure first | A consolidation should lower pressure, not create a new stretch |
If you’re sitting in the top two rows, it’s worth finding out what a consolidation could look like before the next instalment date comes round.
How do lenders treat a payment plan in your application?
Lenders don’t see an ATO payment plan as a black mark on its own. Plenty of sound businesses have used one. What they look for is the pattern around it:
- Lodgements up to date. This matters more than almost anything else. A business with all BAS and returns lodged and a plan in place is a very different proposition from one with three quarters unlodged.
- Instalments paid on time. Your ATO statement of account and bank statements show whether the plan has been honoured.
- Why the debt built up. A one-off cause, such as a big project that paid late or a slow season, is easier to accept than a long run of unpaid GST.
- What’s changed. A separate tax account, a bookkeeper or a set-aside routine tells a lender the debt is unlikely to come back.
Tax debt is considered case by case. Property security often makes larger consolidations possible: property-secured business loans run from $20k to $5m, while unsecured and cash-flow options typically sit between $5k and $500k, sized on turnover and bank statements. Our ATO tax debt loans page covers how lenders view tax debt on its own.
What does the settlement order look like?
Getting the order right avoids the default trap and makes sure every creditor is paid on the same day.
- Pull a current ATO balance for each account you want paid out. Income tax and activity statement plans are separate, so you’ll need a figure for each.
- Gather written payout figures from your other lenders, with the date each figure is valid to.
- Keep paying everything as normal during assessment and approval.
- Confirm amounts a few days before settlement. ATO balances move daily because of compounding interest, so the figure on settlement day will be slightly higher than last month’s.
- Settle. Many lenders pay creditors, including the ATO, directly at settlement, so the money goes where it’s meant to.
- Check the ATO account afterwards to make sure the payment landed on the right account and the plan shows as finalised.
Illustrative example: a landscaping business with three debts
This is an illustrative example, not a real client. A landscaping company has an activity statement payment plan of about $90k with 18 months left to run, a short-term loan with weekly debits, and a supplier account sitting at $25k on extended terms. Trading has recovered after a wet winter, but the three repayments together leave almost nothing in the account at month end.
The owner lists every debt, asks the accountant for current ATO balances and gets payout letters from the short-term lender and the supplier. Lodgements are all up to date and every plan instalment has been paid. The owners also have equity in their home.
A lender looks at the full picture and proposes one property-secured facility to clear the ATO plan, the short-term loan and the supplier, plus a small buffer for the next quarter’s BAS. The plan is paid on the settlement day, the weekly debits stop, and the owner sets up a separate account for GST from the first week. For more on how lenders look at trades, see our guide to landscaping business loans.
What if a consolidation isn’t the right fix?
A new loan only helps if the business can repay it from trading. If every month is losing money, borrowing to pay the ATO simply moves the debt from one creditor to another and adds costs.
If you’re not sure the business is viable, the free Small Business Debt Helpline on 1800 413 828 offers confidential help from financial counsellors, including negotiating payment arrangements with the ATO and other creditors and checking whether the business can keep going. Your accountant is the other essential call. A consolidation works best for businesses that are sound underneath and simply carrying debt in the wrong shape. For a broader look at structuring the new facility, our short-term business loans and secured business loans pages explain the main options.
Thinking of clearing the ATO plan? See where you stand
A payment plan can feel like the one debt that’s under control, right up until a missed lodgement turns it into the most urgent bill on your desk. If your list includes the ATO and a couple of other lenders, it’s worth seeing what one well-structured facility could do.
The enquiry takes about a minute, and there’s no credit check when you first enquire. We don’t hand your details to a pile of lenders, so your phone won’t start ringing with strangers. A real person reads your situation, tax debt and all, and calls you to talk it through. Please answer the form accurately, including the ATO balance and what’s on a plan, so the first option we discuss is one that can actually work.
Frequently asked questions
Can a business loan be used to pay out an ATO payment plan?
Yes. The ATO says you can make extra payments or pay a plan debt off at any time, and some lenders will pay the ATO directly at settlement as part of a consolidation. Tax debt is considered case by case, and lenders will want your lodgements up to date.
Should I stop paying my ATO plan while I apply?
No. Keep every instalment going until the new loan has settled and the ATO has been paid. A plan that defaults makes the full overdue balance payable immediately, which can turn a tidy refinance into an urgent one.
Is it better to keep the ATO plan and only consolidate other debts?
Sometimes. If the plan is small, has only a few months left and the instalments fit easily, it may not be worth borrowing to clear it. The question is whether including it makes the overall repayment easier to carry without stretching the loan too far.
Does paying out the ATO plan fix my BAS problems?
It clears the old debt, but not the habit that created it. Lenders will want to see that GST, PAYG withholding and super are being set aside going forward, otherwise a new tax debt can build up behind the consolidation.
What if my income tax and activity statement debts are on separate plans?
That's normal. The ATO requires separate plans for income tax and activity statement accounts. In a consolidation you can choose to pay out one, both or neither, and you'll need a current balance for each.
Will the lender talk to the ATO for me?
Lenders generally rely on your ATO statement of account and portal records rather than calling the ATO. Your accountant or BAS agent can download current balances for each account so the payout figure is accurate on settlement day.